Mechanism of strand displacement DNA synthesis by the coordinated activities of human mitochondrial DNA polymerase and SSB
Optical Tweezers to Force Information out of Biological and Synthetic Systems One Molecule at a Time.
Bocanegra, R.; Ortiz-Rodríguez, M.; Garcia-Abadillo, I.P.; R-Pulido, C.; Ibarra, B.
Cooperative-dependent folding of single-stranded DNA
Viader-Godoy, C. R. Pulido, B. Ibarra, M. Manosas, F. Ritort.
Physical Review X; 11, 031037 (2021).
DNA replication machinery: Insights from in vitro single-molecule approaches
Computational and Structural Biotechnology Journal Vol 19, 2057-69, 2021
GTP and lipids control self-assembly and functional promiscuity of Dynamin2 molecular machinery
Measurements of Real-Time Replication Kinetics of DNA Polymerases on ssDNA Templates Coated with Single-Stranded DNA-Binding Proteins
Methods in Molecular Biology, vol. 2281, Springer Nature 2021
DNA replication: In vitro single-molecule manipulation data analysis and models
Computational and Structural Biotechnology Journal, 19, 3765-3778 (2021).
In vitro single-molecule manipulation studies of viral DNA replication
The Enzymes. 2021;49:115-148.
Optical Tweezers to Investigate the Structure and Energetics of Single-Stranded DNA-Binding Protein-DNA Complexes.
Methods in Molecular Biology, vol 2281 (2021)
Five Minutes in the Life of a Molecular Shuttle: Near-Equilibrium Measurements of Shuttling Dynamics Using Optical Tweezers.
Building and Probing Small for Mechanics. Advances in Atom and Single Molecule Machines. Springer, Cham. vol 2281 (2021).
Understanding the paradoxical mechanical response of in-phase A-tracts at different force regimes
Nucleic Acids Research April 2020.
Replicative DNA polymerases promote active displacement of SSB proteins during lagging strand synthesis
Nucleic Acids Research 2019, Vol 47, 11, 5723–5734,
Dynamic constriction and fission of ER membranes by reticulon
Nature Communications 10, 5327 (2019)
Dynamics of individual molecular shuttles under mechanical force
Nature Communications volume 9, Article number: 4512 (2018)